BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003F09LP1|AL425159
(988 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig622 1373 0.0
>3x_Contig622
Length = 1958
Score = 1373 bits (689), Expect = 0.0
Identities = 719/727 (98%), Gaps = 3/727 (0%)
Strand = Plus / Plus
Query: 263 aaattgtagcatatgtatatcatatacatacatatatatatatatatcccatagtctcac 322
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 18 aaattgtagcatatgtatatc-tatacatacatatatatatatatatcccatagtctcac 76
Query: 323 gacaactcttctaaatttgcaggagtkggtttgatcttaattctatagtgcgattcgatc 382
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 77 gacaactcttctaaatttgcaggagttggtttgatcttaattctatagtgcgattcgatc 136
Query: 383 tctttcaatttgggtctttcctccttcgtgatgaaatttattgcaacacctttacgtcca 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 tctttcaatttgggtctttcctccttcgtgatgaaatttattgcaacacctttacgtcca 196
Query: 443 aaccgtccggatctaccaatacgatggatatagttctctagattatctggtatatcgtag 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 aaccgtccggatctaccaatacgatggatatagttctctagattatctggtatatcgtag 256
Query: 503 tttatcaccaatgagatctgctggacatcgataccacgagcccacacgtctgttgatatt 562
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 257 tttatcaccaatgagatctgctggacatcgataccacgagcccacacgtctgtcgatatt 316
Query: 563 agcaccctggcttttccactcctgaaatcattcatcacttgatcacgttcttcctgtttc 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 agcaccctggcttttccactcctgaaatcattcatcacttgatcacgttcttcctgtttc 376
Query: 623 atgytaycgtgcattgaggacacagagaaattcgtctgtgtcaacttcctggataaccaa 682
||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 atgtcaccgtgcattgaggacacagagaaattcgtctgtgtcaacttcctggataaccaa 436
Query: 683 tccacttttttccttgtattacagaatatcacacattgtgttatcgttaacgaatcgtat 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tccacttttttccttgtattacagaatatcacacattgtgttatcgttaacgaatcgtat 496
Query: 743 agatcacagagtgtatcaaacttccattcttccttttctacatccacataatattgcttt 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 agatcacagagtgtatcaaacttccattcttccttttctacatccacataatattgcttt 556
Query: 803 atcacgtccaaggatatctcatcccgcttaaccaatatcttcaccgggtcactcatgaac 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 atcacgtccaaggatatctcatcccgcttaaccaatatcttcaccgggtcactcatgaac 616
Query: 863 ttcttggtgatctctaatatatctttactcattgtagcacttaccaccacgacttgaatc 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ttcttggtgatctctaatatatctttactcattgtagcacttaccaccacgacttgaatc 676
Query: 923 gtcggtggtaacttggtgaaaatgtcgtagatttgttgtttaaa-cccaaag-ttctccg 980
|||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 677 gtcggtggtaacttggtgaaaatgtcgtagatttgttgtttaaaccccaaagtttctccg 736
Query: 981 agtagtt 987
|||||||
Sbjct: 737 agtagtt 743
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,877
Number of Sequences: 1807
Number of extensions: 10877
Number of successful extensions: 1379
Number of sequences better than 1.0e-20: 1
length of query: 988
length of database: 10,358,551
effective HSP length: 16
effective length of query: 972
effective length of database: 10,329,639
effective search space: 10040409108
effective search space used: 10040409108
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)